As a researcher I always appreciate to see new opportunities to organize my work and improve my routines. This system does seem interesting.<p>To this day though I've found that Zotero is unbeaten to keep everything organized. I collect all my notes and documents in the Zotero library, and I sync it on multiple devices by placing the Zotero files in a Dropbox folder.<p>In this way I can use whatever app I want to write the actual notes (MD, txt, docx, whatever). I organize the notes in Zotero "folders" and the documents of each note are stored in "sub-folders". The best thing is that these are not actual folders, so the same document, if relevant for multiple researches, can be placed in two or more folders/sub-folders etc.<p>This setup has worked for me for nearly 8 years, with over 50 publications and over 5000 documents in my Zotero library. And best of all, the only thing I'm actually paying for is Dropbox, which I would anyway and, IMHO, is totally worth it. But that's another story. And more importantly, to get things started one can rely on the free tier of Dropbox, so even that's free.<p>So as a researcher (which translates to little money to spare and high volumes of documents to manage), I find that to this date I still have to find a solution that beats my configuration. I would love though to discover new opportunities!